RNApathwaysDB

a database of RNA maturation and decay

RNApathwaysDB contains components involved in the RNA metabolic pathways of three main RNA classes (mRNA, tRNA and rRNA). In this version pathways from Homo sapiens, Escherichia coli and Saccharomyces cerevisiae are contained.

In the upcoming releases, we are expecting to provide more data for a multitude of prokaryotic and eukaryotic pathways for more RNA classes. We are looking for contributors, who would like to help us with supplementing data!

MODOMICS and RNApathwaysDB are two complementary resources whichpresent RNA metabolism at different levels. While MODOMICS presents RNA modification pathways on the level of nucleosides, RNApathwaysDB deals with RNA metabolism with respect to whole RNA molecules. Our ultimate goal is to integrate these databases, however at the moment the users are invited to consult both of these complementary resources, depending on their needs and interests.

You can now browse the following sections:

Proteins

Catalytic RNA molecules

Enzymatic complexes

Pathways

Publications

If you use RNApathwaysDB in your research, please cite this article in your publication:

Milanowska K, Mikolajczak K, Lukasik A, Skorupski M, Balcer Z,
Machnicka MA, Nowacka M, Rother KM, Bujnicki JM
RNApathwaysDB – a database of RNA maturation and decay pathways
Nucleic Acids Res 2013 Jan 1;41(D1):D268-72

Acknowledgements

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