The Reptile Database is a scientific database that collects taxonomic information on all living reptile species (i.e. no fossil species such as dinosaurs). The database focuses on species (as opposed to higher ranks such as families) and has entries for all currently recognized ~14,000 species and their subspecies,[1] although there is usually a lag time of up to a few months before newly described species become available online. The database collects scientific and common names, synonyms, literature references, distribution information, type information, etymology, and other taxonomically relevant information.
History
editThe database was founded in 1995 as EMBL Reptile Database[2] when the founder, Peter Uetz, was a graduate student at the European Molecular Biology Laboratory (EMBL) in Heidelberg, Germany. Thure Etzold had developed the first web interface for the EMBL DNA sequence database which was also used as interface for the Reptile Database. In 2006, the database moved to The Institute of Genomic Research (TIGR) and briefly operated as TIGR Reptile Database[3] until TIGR was merged into the J Craig Venter Institute (JCVI) where Uetz was an associate professor until 2010. Since 2010, the database has been maintained on servers in the Czech Republic under the supervision of Peter Uetz and Jirí Hošek, a Czech programmer.[4] The database celebrated its 25th anniversary together with AmphibiaWeb which had its 20th anniversary in 2021.[5]
Content
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As of August 2024, the Reptile Database lists about 12,200 species (including another ~2,200 subspecies) in about 1250 genera (see figure), and has more than 60,000 literature references and about 22,000 photos. The database has constantly grown since its inception with an average of 100 to 200 new species described per year over the preceding decade.[6] Recently, the database also added a more or less complete list of primary type specimens.[7]
Relationship to other databases
editThe Reptile Database has been a member of the Species 2000 project that has produced the Catalogue of Life (CoL), a meta-database of more than 150 species databases that catalog all living species on the planet.[8] The CoL provides taxonomic information to the Encyclopedia of Life (EoL). The Reptile Database also collaborates with the World Register of Marine Species (WoRMS), the citizen science project iNaturalist,[9] and has links to the IUCN Redlist database. The NCBI taxonomy database links out to the Reptile Database.
See also
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References
edit- ^ Uetz, Peter; Stylianou, Alexandrea (2018). "The original descriptions of reptiles and their subspecies". Zootaxa. 4375 (2): 257–264. doi:10.11646/zootaxa.4375.2.5. PMID 29689772.
- ^ Uetz, P.; Etzold, T. (1996). "The EMBL/EBI Reptile Database". Herpetological Review. 27 (4): 174–175.
- ^ Uetz, P.; J. Goll; J. Hallermann (2007). "Die TIGR-Reptiliendatenbank". Elaphe. 15 (3): 22–25.
- ^ Abraham, S.A. (Jan 9, 2015). "VCU professor manages comprehensive database to map reptilian lineage". Across the Spectrum. Virginia Commonwealth University.
- ^ Uetz, Peter; et al. (16 June 2021). "A Quarter Century of Reptile and Amphibian Databases". Herpetological Review. 52: 246–255 – via Researchgate.
- ^ Uetz, P. (2010). "The original descriptions of reptiles" (PDF). Zootaxa. 2334 (1): 59–68. doi:10.11646/zootaxa.2334.1.3.
- ^ Uetz, Peter; Cherikh, Sami; Shea, Glenn; Ineich, Ivan; Campbell, Patrick D.; Doronin, Igor V.; Rosado, José; Wynn, Addison; Tighe, Kenneth A.; Mcdiarmid, Roy; Lee, Justin L. (2019-11-12). "A global catalog of primary reptile type specimens". Zootaxa. 4695 (5): 438–450. doi:10.11646/zootaxa.4695.5.2. hdl:10141/622594. ISSN 1175-5334. PMID 31719333. S2CID 207962117.
- ^ Catalogue of Life Source databases Archived 2020-09-17 at the Wayback Machine, accessed Aug 2015
- ^ "iNaturalist". Inaturalist.org. Retrieved 9 June 2022.
External links
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- The Reptile Database—Home Page
- Reptile Database Search—Search page at Reptarium