SUPT20H

SPT20 homolog is a protein that in humans is encoded by the SUPT20H gene.

SUPT20H
Identifiers
Aliases	SUPT20H, C13, C13orf19, FAM48A, P38IP, SPT20, FP757, SPT20 homolog, SAGA complex component
External IDs	OMIM: 613417; MGI: 1929651; HomoloGene: 133929; GeneCards: SUPT20H; OMA:SUPT20H - orthologs
Gene location (Human) Chr. Chromosome 13 (human) Band 13q13.3 Start 37,009,312 bp End 37,059,713 bp
Gene location (Mouse) Chr. Chromosome 3 (mouse) Band 3|3 C Start 54,600,228 bp End 54,636,187 bp
RNA expression pattern Bgee Human Mouse (ortholog) Top expressed in left testis right testis right uterine tube ganglionic eminence ventricular zone canal of the cervix right ovary left ovary anterior pituitary body of uterus Top expressed in spermatocyte spermatid seminiferous tubule genital tubercle granulocyte ascending aorta aortic valve internal carotid artery external carotid artery Pituitary Gland More reference expression data BioGPS More reference expression data
Gene ontology Molecular function protein binding transcription coregulator activity Cellular component SAGA-type complex SAGA complex nucleus fibrillar center Biological process autophagy multicellular organism development gastrulation regulation of nucleic acid-templated transcription regulation of transcription by RNA polymerase II Sources:Amigo / QuickGO
Orthologs Species Human Mouse Entrez 55578 56790 Ensembl ENSG00000102710 ENSMUSG00000027751 UniProt Q8NEM7 Q7TT00 RefSeq (mRNA) NM_001014286 NM_001278480 NM_001278481 NM_001278482 NM_017569 NM_019995 NM_001358015 NM_001358017 RefSeq (protein) NP_001014308 NP_001265409 NP_001265410 NP_001265411 NP_060039 NP_064379 NP_001344944 NP_001344946 NP_001394692 NP_001394693 NP_001394694 NP_001394695 NP_001394696 NP_001394697 NP_001394698 NP_001394699 NP_001394700 NP_001394701 NP_001394702 NP_001394703 NP_001394704 NP_001394705 NP_001394706 NP_001394707 NP_001394708 NP_001394709 NP_001394710 NP_001394711 NP_001394712 NP_001394713 NP_001394714 Location (UCSC) Chr 13: 37.01 – 37.06 Mb Chr 3: 54.6 – 54.64 Mb PubMed search
Wikidata
View/Edit Human View/Edit Mouse

Further reading

• Maruyama K, Sugano S (1994). "Oligo-capping: a simple method to replace the cap structure of eukaryotic mRNAs with oligoribonucleotides". Gene. 138 (1–2): 171–4. doi:10.1016/0378-1119(94)90802-8. PMID 8125298.
• Suzuki Y, Yoshitomo-Nakagawa K, Maruyama K, et al. (1997). "Construction and characterization of a full length-enriched and a 5'-end-enriched cDNA library". Gene. 200 (1–2): 149–56. doi:10.1016/S0378-1119(97)00411-3. PMID 9373149.
• Schmidt U, Fiedler U, Pilarsky CP, et al. (2001). "Identification of a novel gene on chromosome 13 between BRCA-2 and RB-1". Prostate. 47 (2): 91–101. doi:10.1002/pros.1051. PMID 11340631. S2CID 20381507.
• Strausberg RL, Feingold EA, Grouse LH, et al. (2003). "Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences". Proc. Natl. Acad. Sci. U.S.A. 99 (26): 16899–903. Bibcode:2002PNAS...9916899M. doi:10.1073/pnas.242603899. PMC 139241. PMID 12477932.
• Ota T, Suzuki Y, Nishikawa T, et al. (2004). "Complete sequencing and characterization of 21,243 full-length human cDNAs". Nat. Genet. 36 (1): 40–5. doi:10.1038/ng1285. PMID 14702039.
• Dunham A, Matthews LH, Burton J, et al. (2004). "The DNA sequence and analysis of human chromosome 13". Nature. 428 (6982): 522–8. Bibcode:2004Natur.428..522D. doi:10.1038/nature02379. PMC 2665288. PMID 15057823.
• Gerhard DS, Wagner L, Feingold EA, et al. (2004). "The Status, Quality, and Expansion of the NIH Full-Length cDNA Project: The Mammalian Gene Collection (MGC)". Genome Res. 14 (10B): 2121–7. doi:10.1101/gr.2596504. PMC 528928. PMID 15489334.
• Wan D, Gong Y, Qin W, et al. (2004). "Large-scale cDNA transfection screening for genes related to cancer development and progression". Proc. Natl. Acad. Sci. U.S.A. 101 (44): 15724–9. Bibcode:2004PNAS..10115724W. doi:10.1073/pnas.0404089101. PMC 524842. PMID 15498874.
• Schmidt U, Fuessel S, Haase M, et al. (2005). "Quantification of C13orf19/P38IP mRNA expression by quantitative real-time PCR in patients with urological malignancies". Cancer Lett. 225 (2): 253–60. doi:10.1016/j.canlet.2004.10.037. PMID 15978328.
• Kimura K, Wakamatsu A, Suzuki Y, et al. (2006). "Diversification of transcriptional modulation: Large-scale identification and characterization of putative alternative promoters of human genes". Genome Res. 16 (1): 55–65. doi:10.1101/gr.4039406. PMC 1356129. PMID 16344560.
• Lim J, Hao T, Shaw C, et al. (2006). "A protein-protein interaction network for human inherited ataxias and disorders of Purkinje cell degeneration". Cell. 125 (4): 801–14. doi:10.1016/j.cell.2006.03.032. PMID 16713569.
• Zohn IE, Li Y, Skolnik EY, et al. (2006). "p38 and a p38-interacting protein are critical for downregulation of E-cadherin during mouse gastrulation". Cell. 125 (5): 957–69. doi:10.1016/j.cell.2006.03.048. PMID 16751104.

External links

• FactorBook SPT20