Volume 4; 2024

Research Articles

Three-dimensional topology-based analysis segments volumetric and spatiotemporal fluorescence microscopy

Luca Panconi, Amy Tansell, Alexander J. Collins, Maria Makarova, Dylan M. Owen

Biol Imaging. 2024; 4: e1. Published online 2023 Dec 14. doi: 10.1017/S2633903X23000260

PMCID:: PMC10951800

Abstract Article PDF–1.5M

Extended correlation functions for spatial analysis of multiplex imaging data

Joshua A. Bull, Eoghan J. Mulholland, Simon J. Leedham, Helen M. Byrne

Biol Imaging. 2024; 4: e2. Published online 2024 Feb 15. doi: 10.1017/S2633903X24000011

PMCID:: PMC10951806

Abstract Article PDF–3.5M

Moment-based metrics for molecules computable from cryogenic electron microscopy images

Andy Zhang, Oscar Mickelin, Joe Kileel, Eric J. Verbeke, Nicholas F. Marshall, Marc Aurèle Gilles, Amit Singer

Biol Imaging. 2024; 4: e3. Published online 2024 Feb 23. doi: 10.1017/S2633903X24000023

PMCID:: PMC10951804

Abstract Article PDF–2.7M

Joint micrograph denoising and protein localization in cryo-electron microscopy

Qinwen Huang, Ye Zhou, Hsuan-Fu Liu, Alberto Bartesaghi

Biol Imaging. 2024; 4: e4. Published online 2024 Mar 6. doi: 10.1017/S2633903X24000035

PMCID:: PMC10988173

Abstract Article PDF–5.2M

Alignment of density maps in Wasserstein distance

Amit Singer, Ruiyi Yang

Biol Imaging. 2024; 4: e5. Published online 2024 Mar 15. doi: 10.1017/S2633903X24000059

PMCID:: PMC11016369

Abstract Article PDF–1.4M

GoldDigger and Checkers, computational developments in cryo-scanning transmission electron tomography to improve the quality of reconstructed volumes

Genevieve Buckley, Georg Ramm, Sylvain Trépout

Biol Imaging. 2024; 4: e6. Published online 2024 Mar 27. doi: 10.1017/S2633903X24000047

PMCID:: PMC11016363

Abstract Article PDF–1.6M

TomoNet: A streamlined cryogenic electron tomography software pipeline with automatic particle picking on flexible lattices

Hui Wang, Shiqing Liao, Xinye Yu, Jiayan Zhang, Z. Hong Zhou

Biol Imaging. 2024; 4: e7. Published online 2024 May 9. doi: 10.1017/S2633903X24000060

PMCID:: PMC11140495

Abstract Article PDF–6.8M

Reconstructing interpretable features in computational super-resolution microscopy via regularized latent search

Marzieh Gheisari, Auguste Genovesio

Biol Imaging. 2024; 4: e8. Published online 2024 May 30. doi: 10.1017/S2633903X24000084

PMCID:: PMC11418082

Abstract Article PDF–2.7M

Algebraic constraints and algorithms for common lines in cryo-EM

Tommi Muller, Adriana L. Duncan, Eric J. Verbeke, Joe Kileel

Biol Imaging. 2024; 4: e9. Published online 2024 May 16. doi: 10.1017/S2633903X24000072

PMCID:: PMC11418086

Abstract Article PDF–2.1M

Seeing or believing in hyperplexed spatial proteomics via antibodies: New and old biases for an image-based technology

Maddalena M. Bolognesi, Lorenzo Dall’Olio, Amy Maerten, Simone Borghesi, Gastone Castellani, Giorgio Cattoretti

Biol Imaging. 2024; 4: e10. Published online 2024 Oct 23. doi: 10.1017/S2633903X24000138

PMCID:: PMC11503829

Abstract Article PDF–1.9M

Articles from Biological Imaging are provided here courtesy of Cambridge University Press