Nuclear retention of RNA as a mechanism for localization
- PMID: 7489499
- PMCID: PMC1369080
Nuclear retention of RNA as a mechanism for localization
Abstract
Two mutant RNAs, one derived from tRNA(imet), the second from U1 snRNA, that are defective in export from the nucleus to the cytoplasm have been studied. In both cases, the RNAs are shown to be transport competent but prevented from leaving the nucleus by interaction with saturable binding sites. This contradicts previous hypotheses to explain the behavior of the tRNA mutant, and highlights a general problem in using mutant RNAs to study nuclear export. In the case of these mutants, it is argued that nuclear retention is likely to be artifactual. However, the additional example of U6 snRNA is described. In this case, nuclear retention appears to be a physiological mechanism by which intranuclear localization is achieved. Evidence that the site of interaction with the La protein in U6 snRNA is important for its nuclear retention is presented.
Similar articles
-
All small nuclear RNAs (snRNAs) of the [U4/U6.U5] Tri-snRNP localize to nucleoli; Identification of the nucleolar localization element of U6 snRNA.Mol Biol Cell. 2002 Sep;13(9):3123-37. doi: 10.1091/mbc.01-12-0596. Mol Biol Cell. 2002. PMID: 12221120 Free PMC article.
-
In vivo selection of RNAs that localize in the nucleus.EMBO J. 1997 Feb 17;16(4):793-806. doi: 10.1093/emboj/16.4.793. EMBO J. 1997. PMID: 9049308 Free PMC article.
-
Visualizing nuclear export of different classes of RNA by electron microscopy.RNA. 1997 May;3(5):498-513. RNA. 1997. PMID: 9149231 Free PMC article.
-
[Mechanism of nuclear transport of U snRNA: based on the chemical synthesis of A 5'-terminal site of U1 snRNA].Tanpakushitsu Kakusan Koso. 1999 Nov;44(14):2080-90. Tanpakushitsu Kakusan Koso. 1999. PMID: 10554601 Review. Japanese. No abstract available.
-
Transport of RNA between nucleus and cytoplasm.Semin Cell Biol. 1992 Aug;3(4):279-88. doi: 10.1016/1043-4682(92)90029-u. Semin Cell Biol. 1992. PMID: 1384772 Review.
Cited by
-
Euplotes telomerase contains an La motif protein produced by apparent translational frameshifting.EMBO J. 2000 Nov 15;19(22):6230-9. doi: 10.1093/emboj/19.22.6230. EMBO J. 2000. PMID: 11080168 Free PMC article.
-
The human papillomavirus type 16 negative regulatory RNA element interacts with three proteins that act at different posttranscriptional levels.Proc Natl Acad Sci U S A. 2000 Apr 25;97(9):4677-82. doi: 10.1073/pnas.070049097. Proc Natl Acad Sci U S A. 2000. PMID: 10781073 Free PMC article.
-
Synthesis and processing of tRNA-related SINE transcripts in Arabidopsis thaliana.Nucleic Acids Res. 2004 Jul 28;32(13):3957-66. doi: 10.1093/nar/gkh738. Print 2004. Nucleic Acids Res. 2004. PMID: 15282328 Free PMC article.
-
tRNA is entrapped in similar, but distinct, nuclear and cytoplasmic ribonucleoprotein complexes, both of which contain vigilin and elongation factor 1 alpha.Biochem J. 1998 Feb 1;329 ( Pt 3)(Pt 3):615-21. doi: 10.1042/bj3290615. Biochem J. 1998. PMID: 9445390 Free PMC article.
-
RNA length defines RNA export pathway.Genes Dev. 2004 Sep 1;18(17):2074-85. doi: 10.1101/gad.1216204. Epub 2004 Aug 16. Genes Dev. 2004. PMID: 15314030 Free PMC article.
Publication types
MeSH terms
Substances
LinkOut - more resources
Full Text Sources
Other Literature Sources