Innovative Microbiological Technologies and Applications in Fermented Food Products for The International Conference on Traditionally Fermented Foods in the World—2024 Acetic Acid Bacteria and Monascus (2024-AAB&M)

A special issue of Foods (ISSN 2304-8158). This special issue belongs to the section "Food Microbiology".

Deadline for manuscript submissions: 15 August 2025 | Viewed by 1235

Special Issue Editors


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Guest Editor
Department of Inorganic Chemistry and Chemical Engineering, University of Cordoba, Córdoba, Spain
Interests: fermentation technology; food technology; acetic acid bacteria; vinegar
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Guest Editor
Department of Life Sciences, University of Modena and Reggio Emilia, Reggio Emilia, Italy
Interests: foods and beverages fermentation; acetic acid bacteria; biopolymers; bacterial cellulose; valorization of agro-industrial wastes via fermentation
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Guest Editor
Department of Agricultural, Food, and Environmental Sciences, Marche Polytechnic University, Via Brecce Bianche, 60131 Ancona, Italy
Interests: food rheology; food texture; innovative approach to traditional foods typing; sustainable extension of food shelf-life; emerging technologies for grape, milk, and cereal derivatives
Special Issues, Collections and Topics in MDPI journals

Special Issue Information

Dear Colleagues,
Biotechnology has not only been a key field of work in the context of what we know as the third industrial revolution, but together with other fields of work such as computing, digitalization, robotics, artificial intelligence, nanotechnology and other areas, it will play a fundamental role in what has been called the fourth industrial revolution, in which the physical, biological and digital worlds are sure to become increasingly interrelated. It is common to find advances in biotechnology in the top 10, which are periodically selected from among those likely to have the greatest influence on society today and in the future.

Among the multiple capacities and potentials of biotechnology, reference can be made to the selection of new microorganisms and the development of bioprocesses with which new products can be obtained and/or existing ones can be optimized; among these bioproducts, foodstuffs can be highlighted. Advances in various techniques, such as omics, now allow us to analyze the activity of genes, the concentration of all proteins, and cell metabolites, which allows us to gain a deeper understanding of the molecular aspects of the processes we work with. This knowledge is essential to optimize the production of bioproducts and the development of new ones, while making better use of available natural resources.

In previous editions of this conference, the main microorganisms considered were acetic acid bacteria (AAB) and their products, among which vinegar stands out. In this conference, AAB will continue to play an important but not exclusive role. The microbial world responsible for food production is very complex, and it is common to find complex microbiota that are responsible for the transformations we require to produce multiple foods. For this reason, bringing together specialists in the production of fermented food, both traditional and non-traditional, is an opportunity to share experiences and increase the possibility of finding novel solutions.

Therefore, in this Special Issue, we aspire to collect papers, based on scientific communications presented at the conference, dealing with any aspect related to food production via fermentation,  except Monascus (for any aspect and/or product related to Monascus, a separate Special Issue has been proposed to which manuscripts should be sent).

By way of example, and without intending to be exhaustive, some aspects of interest include the following:

- Traditional foods;

- Food and health;

- Taxonomy and phylogenesis;

- Genetics and molecular biology;

- Biochemistry and physiology;

- Selection of new microorganisms;

- Characterization of complex microbiotas;

- Improvement and optimization of existing processes;

- Omics technologies;

- Development of sensors for monitoring fermentation;

- Exploitation of natural resources and development of new foods;

- Control of contaminants and improvement of food safety;

- Development of new microorganisms;

- Others.

Prof. Dr. Isidoro Garcia-Garcia
Dr. Maria Gullo
Prof. Dr. Pasquale Massimiliano Falcone
Guest Editors

Manuscript Submission Information

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Submitted manuscripts should not have been published previously, nor be under consideration for publication elsewhere (except conference proceedings papers). All manuscripts are thoroughly refereed through a single-blind peer-review process. A guide for authors and other relevant information for submission of manuscripts is available on the Instructions for Authors page. Foods is an international peer-reviewed open access semimonthly journal published by MDPI.

Please visit the Instructions for Authors page before submitting a manuscript. The Article Processing Charge (APC) for publication in this open access journal is 2900 CHF (Swiss Francs). Submitted papers should be well formatted and use good English. Authors may use MDPI's English editing service prior to publication or during author revisions.

Keywords

  • fermented foods
  • traditional foods
  • acetic acid bacteria
  • other microorganisms
  • complex microbiota
  • food and health
  • food safety
  • omics

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Published Papers (2 papers)

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23 pages, 5998 KiB  
Article
Correlating Microbial Dynamics with Key Metabolomic Profiles in Three Submerged Culture-Produced Vinegars
by Juan J. Román-Camacho, Inés M. Santos-Dueñas, Isidoro García-García, Teresa García-Martínez, Rafael A. Peinado and Juan C. Mauricio
Foods 2025, 14(1), 56; https://doi.org/10.3390/foods14010056 (registering DOI) - 28 Dec 2024
Viewed by 94
Abstract
Although vinegar is a product obtained by a well-known bioprocess from a technical point of view, the complex microbiota responsible for its production and their involvement in the organoleptic profiles are not clear yet. In this work, three acetification profiles in submerged culture [...] Read more.
Although vinegar is a product obtained by a well-known bioprocess from a technical point of view, the complex microbiota responsible for its production and their involvement in the organoleptic profiles are not clear yet. In this work, three acetification profiles in submerged culture using both synthetic and raw materials from Andalusia (Spain) were characterized by metagenomic (16S rRNA amplicon sequencing) and metabolomic tools (stir-bar sorptive extraction with thermo-desorption coupled to gas chromatography–mass spectrometry (SBSE-TD-GC−MS) and high-performance liquid chromatography (HPLC)). A total of 29 phyla, 208 families, and many more genera were identified, comprising bacteria and archaea as well as 75 metabolites, including minor volatile compounds, amino acids, biogenic amines, and other nitrogenous compounds. It can be concluded that Komagataeibacter and Acetobacter were not only the predominant genera but also the ones that most influenced vinegar metabolite profiles by using different metabolic strategies for mutual collaboration, and together with other microbial groups, some of them were previously practically unknown in vinegar. These results can be of interest not only to deepen the basic knowledge about vinegar but also to the vinegar industry by elucidating microbial succession and the key associated metabolites. Full article
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14 pages, 2812 KiB  
Article
Evaluation of the Protein Profile of a Saccharomyces cerevisiae Strain Immobilized in Biocapsules for Use in Fermented Foods
by Juan C. García-García, Miguel E. G-García, Juan C. Mauricio, Juan Moreno and Teresa García-Martínez
Foods 2024, 13(23), 3871; https://doi.org/10.3390/foods13233871 - 29 Nov 2024
Viewed by 548
Abstract
Yeast biocapsules are a novel immobilization technology that could be used in fermentation processes. They are spherical structures consisting of yeast cells encapsulated and attached to the hyphae of a filamentous fungus. Yeast biocapsules offer a cutting-edge approach to cell immobilization, with significant [...] Read more.
Yeast biocapsules are a novel immobilization technology that could be used in fermentation processes. They are spherical structures consisting of yeast cells encapsulated and attached to the hyphae of a filamentous fungus. Yeast biocapsules offer a cutting-edge approach to cell immobilization, with significant potential for advancing fermented food production. By enhancing fermentation control, improving product quality, and increasing process efficiency, these biocapsules represent a key innovation in food fermentation technology, particularly in the production of alcoholic beverages such as beer and wine. Proteomic analysis of two-dimensional gels was carried out to study changes in proteins expressed in (i) co-immobilized yeast cells, and (ii) free-format yeast cells. This analysis showed that the proteins expressed in co-immobilized yeast cells played critical roles in DNA repair, cell cycle regulation, protein synthesis, and translation, whereas the proteins expressed by free yeast cells were mainly related to glycolysis. These findings suggest a defense response of the co-immobilized yeast against fungal interactions, involving regulatory mechanisms at the DNA, RNA, and protein levels. This study opens new avenues for exploring yeast–fungus co-immobilization, including stress responses, the nature of the binding polymers, and the proteomics of biocapsules. Additionally, investigating natural co-immobilization mechanisms between various microorganisms could uncover further biotechnological applications and biocatalytic activities. Full article
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